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Version: 2.0
Template Description: Release candidate with recommendations from Data Quality Workshop. General submission data for all GCP templates. This template should not be used on its own, but only as part of another templateRelease candidate with recommendations from Data Quality Workshop. General submission data for all GCP templates. This template should not be used on its own, but only as part of another template
Mappings for this template
Sections available in this template
| Section Name | Description | Conditions |
| Source | Information on the source of the dataset, the species it concerns and the name and version of the dataset | Mandatory
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| Quality Assessment | Information about the quality measures used | Mandatory
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| Institutions | List of institute codes used in passport data sections and their corresponding decoded name and addresses. | Optional
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Source
Section Description: Information on the source of the dataset, the species it concerns and the name and version of the dataset
| Field Name | Description | Conditions |
| Institute | FAO code(s) of institute which carried out the analysis if the data is from two or more institutes please provide each institute on a new line. The current set of institute codes can be found on the FAO website (http://apps3.fao.org/wiews). If FAO institute code does not exist create a temporary code which starts with an asterisk followed by the 3-letter ISO country code representing the country where the institute is located and the institute's acronym (e.g. '*NLDIFG') and place it in the "Institute codes and decoded values" section with this new code and additional details.
Example: PHL001 | Mandatory
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| Project Code | The name of the GCP project under which these data were collected
Example: GCP G4006.26 | Mandatory
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| Project Name | The name of the GCP project under which these data were collected
Example: Collection of example data | Mandatory
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| Principal Investigator | Name of the Principal Investigator.
Example: Dr John Smith | Mandatory
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| Email Contact | Email of the Principal Investigator.
Example: j.smith@cg.org | Mandatory
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| Species | Taxonomic or common name of species evaluated. If data is from several species, please separate multiple entries separate each species name with a semi-colon.
Example: Oryza sativa; Oryza glaberima | Mandatory
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| Ploidy | The ploidy number of the species.
Example: 2 | Mandatory
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| Dataset Name | Descriptive name of the dataset.
Example: Phenotyping test set | Mandatory
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| Version | Version number of the dataset. Must be a number.
Example: 1 | Mandatory
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| Creation Date | Date the dataset was created in ISO 8601 format. This format is written in the form YYYY-MM-DD, where YYYY is the year in the usual Gregorian calendar, MM is the month of the year between 01 (January) and 12 (December), and DD is the day of the month between 01 and 31. The hyphens can be omitted if compactness of the representation is more important than human readability, for example as in 19950204. If only the month or even only the year is known: 1995-02 or 1995.
Example: 2006-01-15
Example: 19950204
Example: 1995-02
Example: 1995
Example: 199502--
Example: 1995---- | Mandatory
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| Remark | none | Optional
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Quality Assessment
Section Description: Information about the quality measures used
| Field Name | Description | Conditions |
| Quality Measure | If the Quality measure is provided with the data then please provide details of the scale. This will depend on the genotyping software used For example the LI-COR software provides a value from 0 to 100 or 200 if quality of the data is checked manually, whereas the ABI software provides a value from 0 to 1. | Mandatory
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| Standard | Standard followed by the quality assessment. | Mandatory
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| Control | Describes the controls used for quality assessment. | Mandatory
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| Error Estimator | Describes the error estimators used for quality assessment. | Optional
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Institutions
Section Description: List of institute codes used in passport data sections and their corresponding decoded name and addresses.
| Field Name | Description | Conditions |
| FAO Institute Code | FAO institute code (if exists). If FAO institute code does not exist create a temporary code which starts with an asterisk followed by the 3-letter ISO country code representing the country where the institute is located and the institute's acronym.
Example: COL003
Example: *PHLUPLB | Mandatory
Unique
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| Organization Name | Name of the organization.
Example: International Center for Tropical Agriculture | Optional
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| Street | Street address.
Example: Recta Cali-Palmira, km 17 | Optional
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| City/State | City and state where institute is located.
Example: Cali | Optional
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| Zip Code | Postal code.
Example: 9000 AZ | Optional
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| Country | Country in which organization resides.
Example: Columbia
Example: COL | Optional
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| Institutional e-mail | E-mail address.
Example: ciat@cgiar.org | Optional
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| Institutional Telephone | Telephone number.
Example: +57 (2) 4450000 | Optional
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| Fax | Fax number.
Example: +57 (2) 4450073 | Optional
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| URL | Internet address of organizational website.
Example: http://www.ciat.cgiar.org | Optional
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| Primary Contact Name | Name and position of primary contact in the organization.
Example: J. Jones, genebank curator. | Optional
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Copyright (c) 2004-2006 CIMMYT, IRRI
Developed by Guy Davenport (CIMMYT), Genevieve Aquino (IRRI)
This work is licensed under a Creative Commons Attribution-ShareAlike 2.5 License.
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